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SRX200235: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-154811' containing sample 'Treponema socranskii subsp. paredis ATCC 35535'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.4M spots, 888.3M bases, 521.2Mb downloads

UUID: d0342c23-fae7-4184-b0ad-664bd94783b7
Design: Illumina sequencing of Treponema socranskii subsp. paredis ATCC 35535 via random selection
Submitted by: Broad Institute (BI)
Study: HMP reference genome
PRJNA169492 • SRP016597 • All experiments • All runs
Sample: Generic sample from Treponema socranskii subsp. paredis ATCC 35535
SAMN01779544 • SRS372001 • All experiments • All runs
Organism: Treponema socranskii subsp. paredis ATCC 35535
Library:
Name: Pond-154811
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward102  reverse

Experiment attributes: (show all 9 attributes...) (hide...)
analysis_type: AssemblyWithReference
gssr_id: 191918.0
library_type: WholeGenomeShotgun
lsid: broadinstitute.org:bsp.prod.sample:2VRZF
material_type: DNA:DNA Somatic
project: G16313
root_sample_id: SM-2AMQK
sample_id: SM-2VRZF
work_request: 30150
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2012-07-04 05:48:11.0GAPipelineRTA1.15.19.5Sequencer Application 1.6.8.6
Runs: 2 runs, 4.4M spots, 888.3M bases, 521.2Mb
Run# of Spots# of BasesSizePublished
SRR6474382,206,277445.7M261.6Mb2013-01-10
SRR6474392,191,233442.6M259.6Mb2013-01-10

ID:
265124

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